Use fqtk tool to demultiplex fastq files
Usage
demux_fq(fq, samples, read_structures)
Arguments
- fq
A path to the fastq file to demultiplex
- samples
A sample sheet as `data.frame` in tsv format. Requires the
columns 'sample_id', 'patient', 'rep', 'origin', 'barcode'
- read_structures
A character string describing the read structure