Simulate sequencing data and write them to a temporary FASTQ file — example_fastq • pepitope

Simulate sequencing data and write them to a temporary FASTQ file

Usage

example_fastq(
  samples,
  peptide_sheets,
  target_reads = 1000,
  custom = TRUE,
  seed = 91651
)

Arguments

samples: The .tsv or data.frame file containing sample information
peptide_sheets: A list, each item containing construct information
target_reads: How many reads to simulate on average
custom: Whether to add custom modifications to founds
seed: The random seed used for sampling the number of reads

Value

The path to the created FASTQ file