Simulate sequencing data and write them to a temporary FASTQ file

Simulate sequencing data and write them to a temporary FASTQ file

Usage

example_fastq(
  samples,
  peptide_sheets,
  target_reads = 1000,
  custom = TRUE,
  seed = 91651
)

Arguments

target_reads

How many reads to simulate on average

custom

Whether to add custom modifications to founds

seed

The random seed used for sampling the number of reads

sample_sheet

The .tsv or data.frame file containing sample information

peptide_sheet

A list, each item containing construct information

Value

The path to the created FASTQ file