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Filter a fusion VRanges object by number of reads and tools

Source: R/filter_fusions.r
filter_fusions.Rd

Filter a fusion VRanges object by number of reads and tools

Usage

filter_fusions(vr, min_reads = NULL, min_split_reads = NULL, min_tools = NULL)

Arguments

vr

A VRanges object with RNA fusions from readVcfAsRanges

min_reads

The minimum number of linked read support for a fusion

min_split_reads

The minimum number of split read support for a fusion

min_tools

The minimum number of tools that identify a fusion

Value

A filtered VRanges object